rs265222317 SNP Detail

Summary

• ID
  rs265222317
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:79398311 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGGACATG GTAGAAAAGA GTACATGACC
  TGCTTTTCCT TCCCCTCATC TATACCATCA GCCCCATGCA CTGAAGGAAA CCTGAATTCA
  CTTCTTGTCT GTACAAGGGC AACAGCCACA GGACTTAGAA CCCACACATA TTCTATCTAC
  Y
  CCAGACCTCA CAGAGGTGTC CTCAGAGGTA GAGGGCTAAA GGAAGGAGGG GGGCTTCATT
  TGGGCCTGCT TCAGAGTTCT GCCATTCCAG CTCATGGTCC AGACAGCATT TCCTCCTTTT
  GGGCTGTTAT TTAACCCAAA ATATATTTTC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320360538	CHEV_2_79408124	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265222317					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:79398311 () rs orientation: forward

Symbol	Name	Function Class
Gm75287	predicted gene, 75287	within coordinates
Rr560005	regulatory region 560005	1011 bp distal
Rr560006	regulatory region 560006	185 bp distal
Rr560007	regulatory region 560007	1731 bp proximal