rs265252560 SNP Detail

Summary

• ID
  rs265252560
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:4297844 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAATGAGTT AGTTAAATGA
  AAAGAGATTA GTACCTAAAA GCTGCATTAT CCACATATCT TGTAATAATG TTCAGACTCA
  CACTGCACAG GATATTCCCT TTATGTTTTT CCTGACTGAC TGAAATGTGA CCCAATCTTG
  CCTTTTGTGC TTTGACAGAC TGACTGAAGA AGCCAAACGA AAGGAGCATT TTGTGAATGT
  Y
  TAGCTCTCTA GATCATTCTG ATCTTGGCAA GGAAAATAAT ATGAAAAATT CAGTTATAAT
  ATTCTTAAAA GATTTCCTTC ATAGTCGTTT ATGAAAATAA AAATAGCATA TTCCACAATT
  GAGCTAGAAA ATGAAGTGGT CAAGTCTAAT GATAACATCA TAGATTTCTG CTTTTGTTAC
  CATAGAAATA AATCCAAGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324213496	CHEV_13_4247091	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265252560					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:4297844 () rs orientation: forward

Symbol	Name	Function Class
Akr1c19	aldo-keto reductase family 1, member C19	within coordinates
Gm61344	predicted gene, 61344	within coordinates
Marcksl1-ps4	MARCKS-like 1, pseudogene 4	890 bp upstream
Rr283538	regulatory region 283538	1444 bp distal
Rr283540	regulatory region 283540	757 bp proximal
Tssr118223	transcription start site region 118223	1860 bp upstream