rs265264891 SNP Detail

Summary

• ID
  rs265264891
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:3286000 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTCCTCGC GGCGGAAGGA
  GATCCTGGGG TTCGCTGTGC GAGACATGTC GGCGGGGTTT CACGTGAGTG ACACTTGGTC
  CCCACGGGAT TGACAGCGAC TAGCGGAGTG GCATGTGGAC GTAGCTTCAG GTGAGTGACC
  TGTTTTTTCC CAAGAGGCAC TGACAGACAG GCCAGGGACG GAGCCTGAGC GAGGGCTGGG
  M
  GTGGCTGAGC GTGAGTGACA GGGGCCTGGG GCGGGGTCTT AACTAAGCTC CTGCAAGAGA
  CATAGATTTG CATGGGGTCT AAGTTTCATT GCTGCTCGTT TGCATGAATT TGAGTGAATT
  TGAATGGCTG CTTGGTTTTG TTCTACCCAG GTTTATATAA CCTCCCCTGA CCTGTATAAA
  TTAGCATATC GTGTACGTTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323871533	CHEV_12_3236000	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265264891					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:3286000 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4353	CpG island 4353	within coordinates
Gm60416	predicted gene, 60416	within coordinates
Rab10os	RAB10, member RAS oncogene family, opposite strand	within coordinates
Rr265316	regulatory region 265316	within coordinates
Tssr112476	transcription start site region 112476	478 bp downstream
Tssr112477	transcription start site region 112477	199 bp downstream
Tssr112478	transcription start site region 112478	161 bp downstream
Tssr115578	transcription start site region 115578	703 bp upstream