rs265443453 SNP Detail

Summary

• ID
  rs265443453
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:59679209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATTCATTC AATGACGTTA
  GAAAAAAAGA GAGAAATAAA ATAAAATAAA AAGGAGAAAC GGGAAGTAAA CTAGTGTTTG
  TCATGCTCCA AATTCACTTC ATGCTAGGTA TACATGTAGC TCAGGCAGAC CGGATCTTTC
  TGCCACAGGA GCGCCACACC CTTACCCCAG TTTCAAAGGT GCTGATTTTT TTTTTTTTTT
  R
  TAAATTTCTC TTTACATATT TTTAACATTA TAAACTTGAT TTTAAAAAAA AGTTTGCAAA
  AAAAAAAAAG AAAGAAAAAC ACATCAAAAT TAACCAAACC CCAAAACAAT ACAACTCAAA
  TGAATACATC TATGCAATTA AAGTTGACTT TTGGAAACGA AATTGTGAAG CTTCACATTA
  AATTTAACAC ATGTCGAATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324646625	CHEV_14_60060597	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265443453					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:59679209 () rs orientation: forward

Symbol	Name	Function Class
Cab39l	calcium binding protein 39-like	within coordinates
Cpgi6560	CpG island 6560	429 bp distal
Gm45935	predicted gene, 45935	880 bp upstream
Rr404137	regulatory region 404137	702 bp downstream
Rr493049	regulatory region 493049	896 bp distal
Rr493050	regulatory region 493050	769 bp distal
Rr493051	regulatory region 493051	within coordinates
Setdb2	SET domain, bifurcated 2	880 bp upstream
Tssr125903	transcription start site region 125903	1178 bp downstream
Tssr125904	transcription start site region 125904	764 bp downstream
Tssr129008	transcription start site region 129008	873 bp upstream
Tssr129009	transcription start site region 129009	663 bp upstream
Tssr129010	transcription start site region 129010	652 bp upstream
Tssr129011	transcription start site region 129011	453 bp upstream
Tssr129012	transcription start site region 129012	450 bp upstream
Tssr129013	transcription start site region 129013	443 bp upstream