rs265445218 SNP Detail

Summary

• ID
  rs265445218
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:11686077 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCTCCCGC AGGTGGTGCT
  GAGGCTGGCG CCTGGGATAG GGCGTGGCCT TGGCTGCAGG GCGGGGCCTT CTCAGGGTCT
  GCGCAGGAAC GCCGCCTTAG GCGTCTGGTG GTGAAGTTAG GGGCTGGGAG GCGATCACCG
  CTTGAGGAGG CCGCTACTGA TGCCAACGCT GAAGGTGTAG GGGTTGAGGG TGGGCCTGCA
  M
  GTTAGTGTGG TTAGAGGGAC GAGACTTGCC GGGCAGTGGT GGCGCACGCC TTTAATCCCA
  GCACTTGGGC GTCAAAGGCA GGTGGATTTC TGAGTTCAAG GCCAGCCTGG TCTACAGAGT
  CAGTTCCAGG ACAGCCAGGG CTATACAGAG AAACCCTGTC ACGAAAAACA AACAAACAAA
  CAAACAAAAC AAAACAAAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322492730	CHEV_8_11636077	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265445218					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:11686077 () rs orientation: forward

Symbol	Name	Function Class
Ankrd10	ankyrin repeat domain 10	320 bp upstream
Cpgi20087	CpG island 20087	within coordinates
Gm45592	predicted gene 45592	1205 bp upstream
Gm64331	predicted gene, 64331	within coordinates
Mir7238	microRNA 7238	341 bp upstream
Rr186041	regulatory region 186041	within coordinates
Rr400761	regulatory region 400761	59 bp downstream
Tssr80389	transcription start site region 80389	1029 bp upstream
Tssr80390	transcription start site region 80390	998 bp upstream
Tssr80391	transcription start site region 80391	432 bp upstream
Tssr80392	transcription start site region 80392	354 bp upstream
Tssr80393	transcription start site region 80393	334 bp upstream
Tssr80394	transcription start site region 80394	312 bp upstream