rs265451396 SNP Detail

Summary

• ID
  rs265451396
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:115069457 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tggcaagta tctacccacc catctctctg
  gccATAGGGG CACCTGGTTT TGACTGGCCA CCCTAGAACC CCATCCCATC TTAACTCTCT
  AGCAAGCTTG GCAACTTGAT ATTCTGGGTC ATATGTCAAG CTAGGACGAG AAAGATAGCT
  M
  AGTGGTCGGT CACTTGCTTG GTGTATGGGG GTGTGAGGTT GTGTATTTGG TCCTCATGGA
  ACCCATCTTG TCCACCACAG ATTGCCAGTC TGCATCAAGT AGCACTCCTC AAGTATGATC
  CTTCCCGATC CTCTCCAGAA AAGTTCCCCA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323861589	CHEV_11_115039945	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265451396					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:115069457 () rs orientation: forward

Symbol	Name	Function Class
Nherf1	NHERF family PDZ scaffold protein 1	within coordinates
Tssr105846	transcription start site region 105846	1396 bp upstream
Tssr105847	transcription start site region 105847	1678 bp upstream