rs265493985 SNP Detail

Summary

• ID
  rs265493985
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:4733486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGAGTCATC ACAAGGGAAG CCTGGGCTGA
  GAAACCAGAT AGCACTGGCT TGACCCCTTC CCCCATTAGT GAACTAGTCT TCAGACTGTA
  CTGCACGTAG GAATCACAGT TGAGAGTTCA TACAAAATCA CACGGTTGTA CTTTAGGAGT
  S
  AGTGGTCTGA CGGATTTATG TGCATACCTT TAAGTCTGAG ATTGTCGTCC ACGCACTCTC
  TTTTTCAGAA GGTGACCAAC CTGGCATAAG CGTTGCCAGT CACTTTGGGA TCTTGGCTGG
  TAAACGCTTC AGCTCTATAC TTCCCGGGTG                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321727748	CHEV_6_4683486	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265493985					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4733486 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr378854	regulatory region 378854			within coordinates
Rr626051	regulatory region 626051			within coordinates
Sgce	sarcoglycan, epsilon			Intron
				Noncoding-Transcript-Variant