rs265494173 SNP Detail

Summary

• ID
  rs265494173
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:3381573 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAG GTAAGAGCGA GGGGAGGGTC
  M
  GGTGAGGCAA GGGGGCTCCG AGCTA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322091623	CHEV_7_3333157	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265494173					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:3381573 () rs orientation: forward

Symbol	Name	Function Class
Cacng7	calcium channel, voltage-dependent, gamma subunit 7	Intron
Cpgi18206	CpG island 18206	932 bp distal
Cpgi18207	CpG island 18207	within coordinates
Gm72265	predicted gene, 72265	within coordinates
Prkcg	protein kinase C, gamma	1958 bp downstream
Rr641798	regulatory region 641798	92 bp distal
Rr641799	regulatory region 641799	within coordinates
Tssr64248	transcription start site region 64248	981 bp downstream
Tssr64249	transcription start site region 64249	889 bp downstream
Tssr64250	transcription start site region 64250	847 bp downstream
Tssr64251	transcription start site region 64251	220 bp downstream
Tssr64252	transcription start site region 64252	107 bp downstream