rs265534444 SNP Detail

Summary

• ID
  rs265534444
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55254655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AACTTGGCT AATTTCAGGT GATGGCTGTC
  ACTGCACAAA TCCAAGCACT GACGACAAAA GTTCGAGCTG GAACGTATTC TACAGAGAAG
  GTAAGGGCTC CTGCACAGGC TGGAGGGCCA GCTCCGTGGT TACGTCACCC GTCCAGGTGA
  Y
  GTAACCACTT GGATCCCAGC ACTCGTGTCT ACATGACCCA CAATTCTAGC TCGGGCATCC
  CATACACATG TGCCGTGTGA ATGTACATAC ACATAAATAA CTGTAAATCT TAAGGGGGGG
  GTACTTGAAG AGGGAGGACC TCCTCATATG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324641593	CHEV_14_55636035	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265534444					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55254655 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6482	CpG island 6482	1104 bp distal
Gm63347	predicted gene, 63347	1397 bp upstream
Ngdn	neuroguidin, EIF4E binding protein	within coordinates
Rr369831	regulatory region 369831	1575 bp downstream
Rr492392	regulatory region 492392	1734 bp distal
Rr492394	regulatory region 492394	1408 bp distal
Rr492395	regulatory region 492395	916 bp distal
Rr492396	regulatory region 492396	1019 bp distal
Tssr125743	transcription start site region 125743	1627 bp downstream