rs265575022 SNP Detail

Summary

• ID
  rs265575022
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:19317938 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATTG TCCCCAATAT TAGTTAACAC
  R
  TAACTTTAAA GACAGGCATG ATAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320678290	CHEV_3_19163774	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265575022					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19317938 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pde7a	phosphodiesterase 7A			Intron
				Noncoding-Transcript-Variant
Rr573966	regulatory region 573966			within coordinates
Rr573967	regulatory region 573967			1181 bp proximal
Tssr32690	transcription start site region 32690			1153 bp downstream
Tssr32691	transcription start site region 32691			1185 bp downstream
Tssr32692	transcription start site region 32692			1223 bp downstream
Tssr32693	transcription start site region 32693			1233 bp downstream
Tssr32694	transcription start site region 32694			1322 bp downstream