rs265663201 SNP Detail

Summary

• ID
  rs265663201
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr13:32520964 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAAAGGCAT CTAAGTTTTC AAACCTGAAA GCACAGCAGG
  TGTTTGGAGT CTGAAATGAA ATGAGAAACC CAAAACTCCT GGTCAGGAAG TGGTATTTTT
  G
  AGTATTGATA GTACTTCAGG AGAATCCTTG CTGGGGGTAG GAGTGGTGGG CACTTCCAAG
  GCTTCCTTCC CATGAAGTAT CTACCAAACA ACAGTTTTC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324311973	CHEV_13_32428850	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265663201					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32520964 () rs orientation: forward

Symbol	Name	Function Class
A730091E23Rik	RIKEN cDNA A730091E23 gene	1838 bp upstream
Cpgi5422	CpG island 5422	967 bp proximal
Gmds	GDP-mannose 4, 6-dehydratase	Intron
Rr369665	regulatory region 369665	1830 bp upstream
Rr476844	regulatory region 476844	1746 bp proximal
Rr476845	regulatory region 476845	1749 bp proximal
Tssr121995	transcription start site region 121995	1519 bp downstream
Tssr121996	transcription start site region 121996	1573 bp downstream
Tssr121997	transcription start site region 121997	1584 bp downstream