rs265663919 SNP Detail

Summary

• ID
  rs265663919
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:144413934 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCAGCCCC AGAAAGGAAC
  ACCCAGGAGT GCCCAGACTA AGGCCTGCAG CCCTCCTCCA GTGACACAGC AGGGGATCTA
  GGGAACCCTG TTACAGGAAG GGATGTTTCT CAGCAGGGTG TGTGTATGCA TGCTTATGTG
  TGTACATCCA TGAGTGTGTG TGTGTGTGTG TGTGTGTGCG CGCGCGCGCG CGTGTGTGCG
  Y
  GCGCACACGT GTTCGTGGGA GCCTGTGCAC AGCTGACTTT GCTCCCTAGC AAGCAAGGCC
  AGCAGCAGCT CTACCTGCCA CTGGAGGATG CGGTTATCCC AGGCTGCCAG GTGCATCAGA
  ATGCCTCATT AAGGGATTTG GAGACATGGT GTAATCCCCA CTAAGGGATA GATAGATGCT
  CAAGTGTCTC CTCTAGGTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322484924	CHEV_7_152046102	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265663919					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:144413934 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20003	CpG island 20003	727 bp proximal
Fgf4	fibroblast growth factor 4	1189 bp upstream
Rr366757	regulatory region 366757	within coordinates
Rr381621	regulatory region 381621	1128 bp downstream
Tssr70358	transcription start site region 70358	1181 bp upstream