rs265669973 SNP Detail

Summary

• ID
  rs265669973
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129447172 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCGAGATCC AACCAAGTGT CACTTGTTAT
  CCCTGATGGG CAGCATAGTT CTGTTGTGAT TCTGCAGTCT TTCAGGACTG TGCTTTTAGC
  TCTCAGATGG CCTTACAGTG GGATCAGATG GTCCCTTTCC TCGGATGTGA CCCCCCCTGA
  R
  GTTTCCACTG CTCCAATAAT GCCTGAGTGA ATGCGAAGTG TTTGCACGTT CCTTAGTTAT
  CAGAAGGTGT GATTTTATGC TGTTTTTATT CTCTTATTTT AACTATAGCA CATCAAAGTG
  TTGCCTGCAG TTATCTTTGA TAGTATCATG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320505123	CHEV_2_129430988	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265669973					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129447172 () rs orientation: forward

Symbol	Name	Function Class
Rr564956	regulatory region 564956	1460 bp distal
Rr564957	regulatory region 564957	941 bp distal
Rr564958	regulatory region 564958	983 bp proximal
Sirpa	signal-regulatory protein alpha	within coordinates
Tssr20146	transcription start site region 20146	1508 bp downstream