rs265685750 SNP Detail

Summary

• ID
  rs265685750
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:112501401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtgctggaa ttaaaggcgt gcacgaccac
  cgcctggcAA TAAAGAGAGA AATTAATGCC ACCAAAATTT TTCCTCCTCT TGTCACACTA
  GGACTGATTA CTATTCAGTC TACAAGTCTG TGTCCCTCTG GACTGGGCTT TTTTTTCATG
  T
  AAATCTGTAC AAGCTTTCAA CATTAGAATT CCAAATCCTA CAGTGGGGGT GGGGGGATGT
  GGGGGCTGGG GGATGGGGCT GGTGGGGATC AGATCTCAAG GCAAGATAAT GTCATCACAT
  CTACCTGGCT ACTGTCCAAG AACAAAATTC                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324529319	CHEV_13_113155075	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265685750					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:112501401 () rs orientation: forward

Symbol	Name	Function Class
Ankrd55	ankyrin repeat domain 55	within coordinates
D13Mit260	DNA segment, Chr 13, Massachusetts Institute of Technology 260	729 bp proximal
Gm48837	predicted gene, 48837	223 bp upstream
Rr278287	regulatory region 278287	1713 bp proximal
Rr282338	regulatory region 282338	1201 bp distal
Rr282339	regulatory region 282339	601 bp proximal
Tssr121108	transcription start site region 121108	1431 bp downstream
Tssr121109	transcription start site region 121109	1399 bp downstream
Tssr121110	transcription start site region 121110	1277 bp upstream