rs265692983 SNP Detail

Summary

• ID
  rs265692983
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171181671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGATGCCT TCTTCTAGCC
  TCTTTGGGTC CCAGGCATGC ACATAGCAGA CCTATACATA CAGGTAAGTC ACATAAAAAT
  AAATCTTGGG GGGGAAATCT TTATAAAAAT AAGTTTTTGA AAGATCTCGT ATGTGTAAAT
  AATAAGAATA TAAAGAGCTC TATGTAGTAA TACGAAGTGA TGTTGATTTA GAAATTAATT
  T
  AATTAATTTC TAAATCAACA TCCTTCGTAT TATTAATTAA TTAATTAATT AATTTAATTA
  AATGGGGCTA TTTCAGAGGG GAACTTTACA TACACTATGA TTTAATAGGG TAAAGAGACT
  CTCAACATTG ACTAGTCTAT CCCTGTTTAC ATGAGACTAT TGAGGTTTGG TCTGTTGCTG
  TGTATTGCAA TGCTTAAATA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	I/LnJ	JF1/MsJ	MA/MyJ	MOLF/EiJ
ss352385359	MGP_WTSI_1_173284234	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	I/LnJ	JF1/MsJ	MA/MyJ	MOLF/EiJ
rs265692983					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss352385359	MGP_WTSI_1_173284234	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171181671 () rs orientation: forward

Symbol	Name	Function Class
Gm37154	predicted gene, 37154	23 bp upstream
Pfdn2	prefoldin 2	within coordinates