rs265707584 SNP Detail

Summary

• ID
  rs265707584
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61861610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGAAAATC CCAGAACAAA
  AAGGGAGCAA TTCCACAGAA AATGAAGACA TGAGATTTAC TTTATGTTCA TTTGCTAAGG
  AAAAGTCTTT CATGCATCAG TTTTGTAAGA CAGATGAGAG AATGGCGAAG TAAGGAGATT
  GTAGATAAAT GGCAGATGGG TATTGATGAT AGATGGATGG ATAGATGGAT GGATGGGTGG
  R
  TGGGTGGGTG GGTAGATGGA TAGATAAGAA TAGATGGGTA GCTAAATGAT AAAACCAGGT
  AGATGGATGA CAACTTTATC AATAGCTAAA TAGACGACTG TACCAATGAG TGAATAGGGA
  GACAGCCTGT ACAGATAGGT AGGTGGGGTC CGTTAATTCT CTGTCACTCT AACATCTACA
  TGGAGGTGAT CATCTGAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	FVB/NJ	JF1/MsJ	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SJL/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss380608921	MGP_WTSI_10_61488579	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	A	G	G	G	G	G	G	G	A	G	A	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	A	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	FVB/NJ	JF1/MsJ	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SJL/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs265707584					SNP	G	G	G	G	A	G	G	G	G	G	G	G	A	G	A	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	A	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss380608921	MGP_WTSI_10_61488579	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61861610 () rs orientation: forward

Symbol	Name	Function Class
Gm47919	predicted gene, 47919	216 bp downstream
Gm66887	predicted gene, 66887	1123 bp downstream
Rr432503	regulatory region 432503	1159 bp distal