rs265744919 SNP Detail

Summary

• ID
  rs265744919
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:32970902 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTATACAT AGGTTAAGGG
  GGCACTCAAC TATGTATGGG TATACATTTC TGAGACTTGT ATCTTACACA ATTGCACATA
  CATGAAGGTA TCTGTAAGTG TTCATGTGTA TACATGCACA TTGGAACCAA ATTTGAAATC
  AGATGTTTTC CTTGATCAGT CTACACCTTA TTTATTGATG CAGGGTCATT CAATTGAGCT
  Y
  AGAGCTCACC ATAGGCTAGT TGCCCAGCCA GTTTGCTCTA GGGGAACCCC CATCTGAGCT
  TCATAAGCAA TGGACTTACA GGTTCACTGC TCTTCCTGTC CAGAGTTACC ATGGGTACAG
  AGGATCCAAA CTGTTTTCAC ACTTGCTGCA AGTATTTTCA CATGTCCTCA GCTCTATGTA
  AGACAGACAC TCATTTTACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321780317	CHEV_6_32943967	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265744919					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32970902 () rs orientation: forward

Symbol	Name	Function Class
Chchd3	coiled-coil-helix-coiled-coil-helix domain containing 3	within coordinates
Gm53279	predicted gene, 53279	within coordinates
Gm66358	predicted gene, 66358	215 bp downstream
Tssr60215	transcription start site region 60215	318 bp upstream
Tssr60216	transcription start site region 60216	485 bp downstream