rs265770847 SNP Detail

Summary

• ID
  rs265770847
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:46344796 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCCCCCCC CCCCCGCCTT
  TTTCCCTTCC CTCTAAGTTC CAGGTACAGT GAACAAACGT AGCCGCAGTT AAGCACCGTT
  TCTTCCAACC CAGACCAGCA GAGCCCTCTC AGTATTTCCC GACACACCTC GCCTGAACAC
  CACTCAGAGG CGTCTCTGGG CAGTTTCTCA GACGCCCCCT GAGGTCCAGC TTCTTGAAAG
  S
  TTTTCCACTT AGGCGAAGCC ATCCAGCTAA CGCTCTGAAC CACTCCCAGC TTGTGTCCCA
  AAGATTTCAG GAGAAGTCTG GGGCTGGCAT CTCGCCAGTC CACAGCTCCC TCTACCCTGG
  TACCAAGGAA AGCTACTCCG CATGTTTCCC GCCCACGGCA ATGCTGAGAA CCAGAGCTAG
  AACTGTCCCT GTCCCACACA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325609388	CHEV_18_46371383	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265770847					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:46344796 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10017	CpG island 10017	14 bp proximal
Rr345901	regulatory region 345901	1996 bp distal
Rr352866	regulatory region 352866	within coordinates
Trim36	tripartite motif-containing 36	within coordinates
Tssr153216	transcription start site region 153216	722 bp downstream
Tssr153217	transcription start site region 153217	840 bp downstream
Tssr153218	transcription start site region 153218	866 bp downstream
Tssr153219	transcription start site region 153219	1084 bp downstream