rs265899512 SNP Detail

Summary

• ID
  rs265899512
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:111505345 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCT GGACTTGCCG CCCTGAAGCC
  T
  CCGGAGTCGC CGAAGCCGCC CCTCG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324159948	CHEV_12_112777122	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265899512					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:111505345 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5150	CpG island 5150	within coordinates
Eif5	eukaryotic translation initiation factor 5	within coordinates
Gm56546	predicted gene, 56546	676 bp upstream
Gm58608	predicted gene, 58608	within coordinates
Gm60631	predicted gene, 60631	277 bp upstream
Rr403512	regulatory region 403512	783 bp downstream
Tssr115319	transcription start site region 115319	1706 bp downstream
Tssr115320	transcription start site region 115320	668 bp downstream
Tssr115321	transcription start site region 115321	633 bp downstream
Tssr115322	transcription start site region 115322	536 bp downstream
Tssr115323	transcription start site region 115323	429 bp downstream
Tssr115324	transcription start site region 115324	107 bp downstream
Tssr115325	transcription start site region 115325	37 bp downstream
Tssr115326	transcription start site region 115326	523 bp upstream
Tssr115327	transcription start site region 115327	1302 bp upstream
Tssr117828	transcription start site region 117828	955 bp upstream
Tssr117829	transcription start site region 117829	305 bp upstream