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rs265912312 SNP Detail
Summary
  • ID
    rs265912312
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr7:79490356 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TCTTTTTTTT TTTTTTTTTT
TTTTGGTTTT TCGAGACAGG GTTTCTCTGT ATAGCTCTGG CTGTCCTGGA ACCAGGCTGG
CCTCGAACTC AGAAATCTGC CTGCCTCTGC CTCCCAAGTG CTGGAATTAA AGGCGTGCAC
CACCACGCCC TGCCAATAAA TTTGTTCTAA ATTAAAAGCA AGGCACCATT CGTGGTGGCA
Y
ACAACTTTAA TCTCGGCATT GAGGAACAGA GACAAGTGGG TGTCTGTGAG TTTGAGGCCA
GCCTGTTCTA CAGAGCAAGG TTCAGGACAG ACGTTCCTCA ATTTTACACC TGAGAAACTG
TCTAGAAAGC AAAAGAGTTC TTGGGATCAC TCATAGCTGA GATTCAACAG CCTAATAATT
CAGAAGCTAG CACTGAGAAG                                            

Y = C/T

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID		 Submitter
Handle		 Population
ss orientation
 Variation Type
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2 H2-T18/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/6J
C57BL/6NJ
C57BL/10J
C57BL/10SnJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
ss372032928 MGP_WTSI_7_86985494 EVA_MGPV3 EVA_MGPV3 f SNP C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP Consensus Information
SNP Consensus Type
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2 H2-T18/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/6J
C57BL/6NJ
C57BL/10J
C57BL/10SnJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265912312 SNP C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID		 Submitter
Handle		 Population
ss orientation
 Variation
Type		 Alleles
ss372032928 MGP_WTSI_7_86985494 SC_MOUSE_GENOMES SC_MOUSE_GENOMES f SNP C/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr7:79490356 () rs orientation: forward
Symbol Name Transcript Protein Function
Class		 Allele Residue Codon
Position		 AA
Position
Anpep alanyl aminopeptidase, membrane within coordinates
Gm71751 predicted gene, 71751 1811 bp upstream
Tssr67371 transcription start site region 67371 1221 bp upstream
Tssr67372 transcription start site region 67372 1409 bp upstream
Tssr67373 transcription start site region 67373 1869 bp upstream
Tssr67374 transcription start site region 67374 1915 bp upstream
Tssr67375 transcription start site region 67375 1949 bp upstream
Tssr73155 transcription start site region 73155 1916 bp upstream
Tssr73156 transcription start site region 73156 1852 bp upstream
Tssr73157 transcription start site region 73157 1654 bp upstream
Tssr73158 transcription start site region 73158 1404 bp upstream
Tssr73159 transcription start site region 73159 1354 bp upstream
Tssr73160 transcription start site region 73160 1110 bp upstream
Tssr73161 transcription start site region 73161 295 bp downstream
Tssr73162 transcription start site region 73162 312 bp downstream
Tssr73163 transcription start site region 73163 371 bp downstream
Tssr73164 transcription start site region 73164 516 bp downstream
Tssr73165 transcription start site region 73165 1077 bp downstream
Tssr73166 transcription start site region 73166 1118 bp downstream
Tssr73167 transcription start site region 73167 1326 bp downstream
Tssr73168 transcription start site region 73168 1338 bp downstream
Tssr73169 transcription start site region 73169 1366 bp downstream
Tssr73170 transcription start site region 73170 1397 bp downstream
Tssr73171 transcription start site region 73171 1468 bp downstream
Tssr73172 transcription start site region 73172 1496 bp downstream
Tssr73173 transcription start site region 73173 1512 bp downstream
Tssr73174 transcription start site region 73174 1600 bp downstream
Tssr73175 transcription start site region 73175 1621 bp downstream
Tssr73176 transcription start site region 73176 1679 bp downstream
Tssr73177 transcription start site region 73177 1709 bp downstream
Tssr73178 transcription start site region 73178 1735 bp downstream
Tssr73179 transcription start site region 73179 1799 bp downstream
Tssr73180 transcription start site region 73180 1866 bp downstream
Tssr73181 transcription start site region 73181 1949 bp downstream
Tssr73182 transcription start site region 73182 1968 bp downstream
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory