rs265920949 SNP Detail

Summary

• ID
  rs265920949
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:110446722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTCTCATC ACTTCTCTTG
  TGATTCTCTT TCATAGGATT TTCCCTTCGT ACCATACGTA TTGTTTCCCT TTTTTTTTTT
  TTTTTTTTTT TGCGTTTCTA GTATTATCTC TAATTTAAAC TCTCCTGAAC TACACAGGTT
  ATCTTATGCT ACTTGTTTAA AAAACAACTT CTCTCACCCT GTAAAATTAA CTCTTTATTT
  Y
  CTGTCACAGT GAATGTTACT GCTGTTTATG CAGTCATTTA ATCTCAAAAT GTGGGACTTT
  TCTGACATTC CTCCTATGTG GATTTATATC CAAAGATACT AATCATAGTA ATTGTCACGG
  TAAATCTATT GTTATTTTCA TCTGTAAATT ATATATTCAA TGTCACTTAG ATTAGGAAGT
  ATTACTTTGG TTATAAGTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321257619	CHEV_4_110262130	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265920949					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:110446722 () rs orientation: forward

Symbol	Name	Function Class
Agbl4	ATP/GTP binding protein-like 4	within coordinates
Rr377006	regulatory region 377006	1442 bp downstream
Tssr38375	transcription start site region 38375	108 bp downstream