rs265927534 SNP Detail

Summary

• ID
  rs265927534
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:70352564 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACTG GCCTTGAACT CAGAAATCCG
  S
  CTGCCTCTGC CTCCCCAGTG CTGGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322697756	CHEV_8_72423813	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265927534					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:70352564 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20428	CpG island 20428	1481 bp proximal
Ndufa13	NADH:ubiquinone oxidoreductase subunit A13	within coordinates
Rr400887	regulatory region 400887	1617 bp upstream
Rr664594	regulatory region 664594	658 bp distal
Rr664595	regulatory region 664595	1780 bp proximal
Tssr2594	transcription start site region 2594	1854 bp upstream
Tssr81543	transcription start site region 81543	1220 bp downstream
Tssr81544	transcription start site region 81544	1718 bp downstream
Tssr81545	transcription start site region 81545	1747 bp downstream