rs265933771 SNP Detail

Summary

• ID
  rs265933771
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97747123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCCCAGAA GCTCCCTGCA
  ATCTCACTTC CCTCTGTTTG TCCACAAGCG TCTTCAGTCA CACATCCTGA CCAGGAAAGG
  TACCATCAAA GTCTGCTGTT TAGGACCATG ACAGGACACA AGAGAGTGGA AGAGTGACCA
  CGCCTTCATA CATGAGCACA GATACAATTG GATGTCACCT CAGACTTTAG GGTAAACTAT
  W
  ACCCTACAGC AGCCTCCCCA CTTATGTTTC CACAACAGTA GATCTCCAAG CCTCACAGCC
  TCCCTCTACC ATGTGGATGC AACACTTCCT TCTACCACAG TCAAGGCTGT GTGCCTCCAC
  ATTGATCCTG GGTCCTTAGT GAGCCGTGCG GTAAGGCAGC TAATCAGAGG AACATTTAAG
  AGAGAAAAAG AAAATGAAAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323123540	CHEV_9_97765489	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265933771					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97747123 () rs orientation: forward

Symbol	Name	Function Class
Clstn2	calsyntenin 2	within coordinates
Rr198247	regulatory region 198247	1123 bp distal
Rr205510	regulatory region 205510	1163 bp distal