rs265946630 SNP Detail

Summary

• ID
  rs265946630
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:95395460 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTCAAGA CAGGGTTTCT
  CTGTGTAGTC CTGGCTGTCC TGGAACTCAC TCTATAGACC AGGCTGGCCT CGAACTCAGA
  AATCTGCCTG CCTCTGCCTC CCAAGTGCTG GGATTAAAGG CGTGTGCCAC TACCGCCCTG
  CTTATTGACC TTTTTAGAGA GTTCAGCAAT GTAGCCTCCT AGACTAATGC TTCCCTGGTC
  R
  CTCCCCCACC CCCTTCACTA TACCCCCATC AACCAAAAAA TAAACTTCAA CTTCTGTATG
  GTAAATGTAC TTGCTTCTGT GACTCCGTCT CCTGAGCCTA CTCCTACTCT CAGAGTTCAT
  TCTTTCTTTC AGTTCCCTCC CCTACTGCTC CTTTCTTCAG TGTCAGTTAT ATACAGGGTT
  ACTTTGCAAT CTCCTTATTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323100855	CHEV_9_95413826	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265946630					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:95395460 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22151	CpG island 22151	815 bp distal
Gm28424	predicted gene 28424	within coordinates
Rr206888	regulatory region 206888	259 bp distal
Rr383784	regulatory region 383784	within coordinates
Tssr90919	transcription start site region 90919	1515 bp upstream
Tssr90920	transcription start site region 90920	1499 bp upstream
U2surp	U2 snRNP-associated SURP domain containing	1411 bp upstream