rs265956024 SNP Detail

Summary

• ID
  rs265956024
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:8107158 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAGAAATGA GCTGAAGTCC TAGAGGAAGA
  CCACTTAGGC AGATGTGGGA GGTGTACTGT CAGAGACAGA GGGACCCTCA TTTTAGATAT
  AACCGGGCCG GCCATCCCTG TTCTTCCCAA GCCACACCTG TCAGCCCTGT ACTAACTCCA
  S
  CCTTACTTAG TACTTCAAGT ACTTCAAAAA CACCGCAAAG GCTGTAAAAA CCAACAGGAA
  AACAGTCCTA AGCCTAGCCA CCAGGTTGCT TCCGGTGCAC TGACCTCTGT AAGCTGGTTA
  ATAGGGATTT TTAAAGTGGG TCTGCGTTTA                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321459857	CHEV_5_8057158	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265956024					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:8107158 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15530	CpG island 15530	250 bp distal
Gm15730	predicted gene 15730	1605 bp downstream
Rr607089	regulatory region 607089	621 bp distal
Rr607090	regulatory region 607090	436 bp distal
Rr607091	regulatory region 607091	895 bp proximal
Sri	sorcin	within coordinates
Tssr45107	transcription start site region 45107	607 bp downstream
Tssr45108	transcription start site region 45108	573 bp downstream