rs265986175 SNP Detail

Summary

• ID
  rs265986175
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:50845087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCATCTTA TCTAAACCTT
  GGTATTTGTG TATTTCATCT GGACATGACT ATTCTTCCAG TTAAGTTAAC TTCAGTATAA
  CTATCGGTCT GAGGAAACTC ACAGCGGTAA AATAATTAGC CTCATATTAC AGATGTAAGC
  TAAGGCAGTG TTGTTTGCCA CAGTGTCTGC AGTTTCCCGG CAGTACGTGT TCCCATCCAG
  R
  ACTTTATATT GCACATAGAT GTTGCAGATT ACATTTTTTA TTTAAATAGA TCCTTGTTTC
  CACTACTTTT CTTCTATGTT ATTGTCAGTC ATAGAGAATA AAGCACAGCT GTTTTATGTA
  TTTTTTTGAG TTTGTGCTGC ACCCCCATTG TTCACTCCAA TTACCTGTTA CCTCCGAAGT
  ATCCCCATGA GCACCATTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323299472	CHEV_10_50688797	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265986175					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:50845087 () rs orientation: forward

Symbol	Name	Function Class
Sim1	single-minded family bHLH transcription factor 1	within coordinates
Tssr93227	transcription start site region 93227	370 bp upstream