rs265994460 SNP Detail

Summary

• ID
  rs265994460
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:115150876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAAGTTACA AACCACCTCG TTCGCAAATT
  CTAATCCGTA TCCGAGTTCC TACTTGGCGA AGAAAGAAGA AGGGCTGATG GTCTCGGAGA
  CCACAGAGTG AAAACACCTG GTGTCCCCAG CCGAAGCCCA TCAGAGGGGA AAACCAGCAC
  R
  CAGACCGGGG GACTCCCCGA CCTGCGCAGC CTCCACCGGC AACTGGGGAC TTTTCCGGGT
  CCTCTCCCTC CCCACTGTGG GTCTTGACAT CTACCGTGTG CTGAGGCCCG CGGGTCCCCA
  AAGCGATTGC AAAAGGCAAT GGGAAGGCAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323484103	CHEV_10_114752027	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265994460					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:115150876 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2204	CpG island 2204	within coordinates
Gm10752	predicted gene 10752	675 bp upstream
Gm67120	predicted gene, 67120	658 bp upstream
Rab21	RAB21, member RAS oncogene family	within coordinates
Rr402237	regulatory region 402237	493 bp upstream
Rr402238	regulatory region 402238	1189 bp upstream
Rr439192	regulatory region 439192	1697 bp distal
Rr439193	regulatory region 439193	597 bp proximal
Rr439194	regulatory region 439194	610 bp proximal
Rr439195	regulatory region 439195	669 bp proximal
Rr439196	regulatory region 439196	835 bp proximal
Tssr95806	transcription start site region 95806	60 bp upstream
Tssr95807	transcription start site region 95807	112 bp upstream
Tssr95808	transcription start site region 95808	669 bp upstream
Tssr95809	transcription start site region 95809	701 bp upstream
Tssr99318	transcription start site region 99318	84 bp upstream
Tssr99319	transcription start site region 99319	41 bp upstream
Tssr99320	transcription start site region 99320	536 bp downstream
Tssr99321	transcription start site region 99321	575 bp downstream
Tssr99322	transcription start site region 99322	646 bp downstream