rs266014887 SNP Detail

Summary

• ID
  rs266014887
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:61676171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCTATGTGT GCCATTATGA GGCTGAAAAG
  CAAATTAACC AGGGTTATTT AATAAACATG AAATATAAAC ACTAAGCCCT ATGCCCAGTT
  ACTAGTGAGG GGTCATGAAA GTGCACAGGG TGTACTGCTC AAACGCTGGT GTAGCTGCAG
  K
  CTTCCGTTAT CTACTGCAGA CATGGATTTT GCTGCATTCC ATAAGACCTG CTTCATCTAA
  TCTGTGAGTG GGATGGGGCG AGTCTGTGTG TTCTTCATAG TTAACTTGGG GAATCTCAAA
  GCCAGGAAGC TGAAGGCTCT GGGTACCCGA                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319741942	CHEV_1_61683586	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs266014887					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:61676171 () rs orientation: forward

Symbol	Name	Function Class
Cpgi308	CpG island 308	1593 bp proximal
Pard3b	par-3 family cell polarity regulator beta	1812 bp upstream
Rr29520	regulatory region 29520	1229 bp proximal
Tssr95	transcription start site region 95	1900 bp upstream
Tssr6971	transcription start site region 6971	1807 bp upstream
Tssr6972	transcription start site region 6972	1857 bp upstream
Tssr6973	transcription start site region 6973	1930 bp upstream
Tssr6974	transcription start site region 6974	1981 bp upstream