rs266056479 SNP Detail

Summary

• ID
  rs266056479
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:105114741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACCTACCT CTCTATTATT
  GATCCAATAA AAGTGGGATC CATTTCTTTT TTTTAACAAT TTTTAAAAGA TTTATTTATT
  TATTATATGT AAGTACACTG TAGTTGTCTT CAGACACACC AGAAGAGGGT GTCAGATCTC
  ATTACAGATG GTGTGAACCA CCATGTGGCT GCTGGAATTT GAACTCAGGA CCTCTGGAAG
  R
  GCAGTCAGTG CTCTTAACTG CTGAGCCATC TTTCCAGCCC AGGATCCATT TCTTATTGAC
  TTTTATATAC CTAGCATCCA ACACAGGTGC TCAATTAATG GCCACAGAAT AAATAAATGC
  AATGGATAAA TGTGGAATGA ATATACACCG AGGTCCCAGA GAATGTAGAC TCTGATGCAA
  AGGGCCTAGG AAGCCACATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321243324	CHEV_4_104930149	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs266056479					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:105114741 () rs orientation: forward

Symbol	Name	Function Class
Rr596568	regulatory region 596568	1894 bp distal
Rr596569	regulatory region 596569	429 bp distal
Rr596570	regulatory region 596570	479 bp proximal
Tssr38159	transcription start site region 38159	437 bp downstream
Tssr38160	transcription start site region 38160	993 bp upstream
Tssr38161	transcription start site region 38161	1070 bp upstream