rs266094350 SNP Detail

Summary

• ID
  rs266094350
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:138171695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtcttttgg tatagcattg gaaatgtaaa
  tgagctaaat acctaataaa aaatggaaaa aaaaaAAAAA AGATGTTACC TAGTTCTTTT
  CAAATTAGAG TAGTTTTTGT CAAAAAAAAA AACAAAACAA AACTaatttg acagaagctt
  R
  agttatctgg gaagaaggaa cctcgactta aaaaaaatgc ctccattaga ctggtctaga
  attaagtaag tctttgggga ttttcttgat tagtcattta tatgggaggg ttcagcccac
  tgggaatcat gccatctctg agcaggaggt                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320000284	CHEV_1_140140534	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs266094350					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:138171695 () rs orientation: forward

Symbol	Name	Function Class
Gm53479	predicted gene, 53479	284 bp upstream
Rr419685	regulatory region 419685	19 bp proximal
Rr419686	regulatory region 419686	196 bp proximal
Rr419687	regulatory region 419687	601 bp proximal
Rr419688	regulatory region 419688	1592 bp proximal