rs266104692 SNP Detail

Summary

• ID
  rs266104692
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:83813946 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGCGATCCA CTCACTCGAT CGGCAGGTAC AACCATCACC
  TACTCTACAC TAGACATGCA CAAGAACGTC GGCTAGCTTT TTCCCTTTCT CTCTCTCTCT
  Y
  TTTTTTTTTT TTCGTTTGGT TTTTCGAGAT ATGGTTTCTC TGTATAGCTC TGGCTGTCCT
  GGAACTCTCT TTGTAGACCA GGCTGGCCTC AAACTCAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	CAST/EiJ	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	I/LnJ	JF1/MsJ	MA/MyJ	MOLF/EiJ	NZW/LacJ	PWK/PhJ	SEA/GnJ	SPRET/EiJ	ST/bJ	WSB/EiJ	ZALENDE/EiJ
ss399263511	MGP_WTSI_17_83905857	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	T	C	C	C	C	C	C	T	T	T	T	T	T	T	T	C	T	C	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	CAST/EiJ	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	I/LnJ	JF1/MsJ	MA/MyJ	MOLF/EiJ	NZW/LacJ	PWK/PhJ	SEA/GnJ	SPRET/EiJ	ST/bJ	WSB/EiJ	ZALENDE/EiJ
rs266104692					SNP	C	C	C	T	C	C	C	C	C	C	T	T	T	T	T	T	T	T	C	T	C	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss399263511	MGP_WTSI_17_83905857	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:83813946 () rs orientation: forward

Symbol	Name	Function Class
Cox7a2l	cytochrome c oxidase subunit 7A2 like	within coordinates
Rr333502	regulatory region 333502	746 bp distal
Rr333503	regulatory region 333503	255 bp proximal
Rr336331	regulatory region 336331	within coordinates