rs266150087 SNP Detail

Summary

• ID
  rs266150087
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:13284231 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGCCCAGA TTAAAGGTGT
  GTTCCTTAAC TCGGAGATTC AATCTTCTGG AATCCATAGC CACTATGGCT CAAGATCTTC
  AAACCAAGAT CCAGATAAGG ATCTCCAAGC CTCCAGATAA GGGTCACTGG TGAGCCTTCC
  AATTCCAAAT TGTAGTTCAT TCCAAATATT GTCAAGTTGA CAACCAGGAA TAGCCACTAC
  A
  CTCTGCTAGA CAGTGGTCCA GCCTGGGCCC TCACAGTGCC ACTCCTTGGC TCTGCTAGAC
  AGTGGTCCAG CCTGGGCCCT CACAGTGCCA CTCCCTGGCT CTGCTAGACA GTGGTCCAGC
  CTGGGCCCTC ACATGCAGCT CTTTACTTTT GGCCAATGAG GCAATGAGTA CTGGGATGGT
  CAGTGAATAT CAGCTCCTGA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J
ss348672415	MGP_WTSI_1_13204088	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J
rs266150087					SNP	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss348672415	MGP_WTSI_1_13204088	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:13284231 () rs orientation: forward

Symbol	Name	Function Class
Ncoa2	nuclear receptor coactivator 2	within coordinates
Rr370880	regulatory region 370880	807 bp upstream