rs266153681 SNP Detail

Summary

• ID
  rs266153681
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24914046 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTGAGGAA GGAGAAGGCC CCCAAACCCC
  AACATCCCTT TTGGTGTCCC CTCTCCTAGG AACCTGTCAC TTCTGAATCT ACTGTTCTAG
  GCCCCTCTCT ATGACATCAG CTATGCCCCC CCCCCTTTTT ttgtgtttct ttgagacagg
  R
  tttctctgtg tagccctggc tgtcctggaa ctcactctgt agagcaggct ggcctcgaac
  tcagaaaacc acctgccact gcttgccaag tgctgggatt aacggcgtgc gccaccaccg
  cccggcATCA GCTAGGCCCG CTCTAGGGAC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325333064	CHEV_17_24832017	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs266153681					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24914046 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8739	CpG island 8739	532 bp proximal
Gfer	growth factor, augmenter of liver regeneration	within coordinates
Noxo1	NADPH oxidase organizer 1	1162 bp upstream
Rr523392	regulatory region 523392	624 bp proximal
Rr523393	regulatory region 523393	986 bp proximal
Rr523394	regulatory region 523394	1447 bp proximal
Tssr5034	transcription start site region 5034	1484 bp downstream
Tssr143060	transcription start site region 143060	1204 bp upstream
Tssr143061	transcription start site region 143061	1588 bp upstream
Tssr146764	transcription start site region 146764	915 bp downstream
Tssr146765	transcription start site region 146765	993 bp downstream
Tssr146766	transcription start site region 146766	1049 bp downstream
Tssr146767	transcription start site region 146767	1075 bp downstream
Tssr146768	transcription start site region 146768	1125 bp downstream
Tssr146769	transcription start site region 146769	1433 bp downstream
Tssr146770	transcription start site region 146770	1469 bp downstream
Tssr146771	transcription start site region 146771	1497 bp downstream