rs266169277 SNP Detail

Summary

• ID
  rs266169277
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:56631847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTG CTTTGGCCAG CCCAGGCTCC
  R
  CATGTGCTCT GAGATATGTG AAGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322970917	CHEV_9_56572370	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs266169277					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:56631847 () rs orientation: forward

Symbol	Name	Function Class
Lingo1	leucine rich repeat and Ig domain containing 1	within coordinates
Rr195802	regulatory region 195802	954 bp proximal
Rr204237	regulatory region 204237	1746 bp distal
Rr204238	regulatory region 204238	1211 bp proximal