rs266208259 SNP Detail

Summary

• ID
  rs266208259
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185416675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCCCCTTC TGTATGTATG
  TGAATACATT CATGTGTGTG CACAGTGTCC AGGTATGGTG GAGGTCAGAG ATCACCCCTG
  GGAATCTTCT TCAATCACTT TCTACTTTAT CTTTTGAGAC AGAGTCTCTA ACTGAACCTG
  TAGCTCATGT ATTTGGCTGG CCTAGGTGGC CACCGAGCCC CAACGAGCCT CTTGGCTTGA
  M
  CTTCTAGTGC TGGGATGACA GGTACAAGCC GTGCCGTGAG CCTTGCCTTT CACATGAGTG
  TTGGAGATCT AAGCACAGGT CTCCGTGCTG GTTTGGAGAG CACCTTATTC ACTGAGCCAT
  CTCCTTGGGC CTCTCACATA TTGTTAGATT TCGTGGTTGG TGTGGGGAAT CAGACAGCGC
  TGATGAAGGC ATGAGCAGAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320178629	CHEV_1_187508357	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs266208259					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185416675 () rs orientation: forward

Symbol	Name	Function Class
Rr425420	regulatory region 425420	1918 bp distal
Rr425422	regulatory region 425422	320 bp proximal
Rr425423	regulatory region 425423	508 bp proximal