rs266216949 SNP Detail

Summary

• ID
  rs266216949
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:100182217 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCACGTGCC TGTCTGAGGC
  TGAGCTAAAC AGTTAAGTTG GGGAAAATAA AAGCGGTCAG GCTTGATTCT GCTATCTTGA
  ACACAAATAT CTTGGCGTCA CGGACACACA AGCACCATCT GCCTGTAGGT GTGCCGATGG
  TGGGAGCCAC TCTATCTGAT GCAAAATTGA GCACCGTCAG CTGTTTGACA GACAAAACAC
  W
  CCGCGCAGTG CTTCCCACTG GCTGTTGTGC ACACCGCCAT GGCTTTAGCT GCTCCACAAT
  AATCCCCAAA CTCTGAATTT GCAACACCCC AGGGTATTTC TAGTCACTAT AAGGGATTTT
  GAAAGAGTCT TAAAATTTCT CAAAAACAAA TTAGTGTCAG TGAACTTTAA GAAGTAAAGA
  GGCTCTACAC CAGGCCTTCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323141708	CHEV_9_100200583	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs266216949					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:100182217 () rs orientation: forward

Symbol	Name	Function Class
Gm28167	predicted gene 28167	within coordinates
Rr685479	regulatory region 685479	1453 bp proximal
Rr685480	regulatory region 685480	1579 bp proximal