rs26823022 SNP Detail

Summary

• ID
  rs26823022
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:32244812 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAG TTTCCTCCTG TCCAGGCGCT
  R
  CATGAGGACC CCATCAACCC TGAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss37057543	NES08355969	PERLEGEN	MM_PANEL2	f	SNP	A		G		A			A	G	G
ss38814591	mCV24510881	ABI	CRAMUS_MOUSE	f	SNP		G		A		G
ss131933809	ENSMUSSNP4252831	ENSEMBL	ENSEMBL_Sanger	f	SNP		G				G
ss323630329	CHEV_11_32194812	CHEVERUD	SCREENING_POP	f	SNP							A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs26823022					SNP	A	G	G	A	A	G	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37057543	NES08355969	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:32244812 () rs orientation: forward

Symbol	Name	Function Class
Gm73808	predicted gene, 73808	within coordinates
Gm74521	predicted gene, 74521	1676 bp downstream
Hba-a2	hemoglobin alpha, adult chain 2	1677 bp upstream
Rr444566	regulatory region 444566	1441 bp distal
Rr444567	regulatory region 444567	986 bp distal
Rr444568	regulatory region 444568	685 bp distal
Rr444569	regulatory region 444569	1187 bp proximal
Tssr100842	transcription start site region 100842	1679 bp upstream