rs26823024 SNP Detail

Summary

• ID
  rs26823024
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:32244786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCTGCCC TTCCCTCATC
  CTCTGCCCCT GAACTTTATT CTTTCTGAAG ACACTCCACA GTTTTGCCTC CTACAAGACC
  TACTTCCTTA ACTAAGACAT GAGTCCCTCT CTGCCCTGGT AGCAGCCCAA GGCAAGAGGT
  GGCATATACA TTCAACAACT GGGCAGGCCA CCTAGGTAAC ATTTGCACTG TCATGTCAGC
  Y
  CAGAGTTTCC TCCTGTCCAG GCGCTACATG AGGACCCCAT CAACCCTGAG GTGACTGGTG
  GCTGGGCAGG GGAGTGAGCA GGGCTCTGAG GTATTGTTGG TCCTTCACCT AATACGAGAG
  AACCTCCTGT GGTGTATACA GCCACTGACC CATGTTTCCT TTCCCCATAG TTCCTGAGCC
  AAGCATGCTC AGTACAAGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	CAST/EiJ	NZW/LacJ	PWD/PhJ
ss37057545	NES08355966	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	CAST/EiJ	NZW/LacJ	PWD/PhJ
rs26823024					SNP	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37057545	NES08355966	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:32244786 () rs orientation: forward

Symbol	Name	Function Class
Gm73808	predicted gene, 73808	within coordinates
Gm74521	predicted gene, 74521	1702 bp downstream
Hba-a2	hemoglobin alpha, adult chain 2	1703 bp upstream
Rr444566	regulatory region 444566	1415 bp distal
Rr444567	regulatory region 444567	960 bp distal
Rr444568	regulatory region 444568	659 bp distal
Rr444569	regulatory region 444569	1213 bp proximal
Tssr100842	transcription start site region 100842	1705 bp upstream