rs26823025 SNP Detail

Summary

• ID
  rs26823025
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:32244761 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAA CAACTGGGCA GGCCACCTAG
  R
  TAACATTTGC ACTGTCATGT CAGCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss37057546	NES08355965	PERLEGEN	MM_PANEL2	f	SNP			A		G			G	A	A
ss38781972	mCV24510882	ABI	CRAMUS_MOUSE	f	SNP	G	A		G		A
ss131933806	ENSMUSSNP3890047	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A				A
ss323630328	CHEV_11_32194761	CHEVERUD	SCREENING_POP	f	SNP							G				A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs26823025					SNP	G	A	A	G	G	A	G	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37057546	NES08355965	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:32244761 () rs orientation: forward

Symbol	Name	Function Class
Gm73808	predicted gene, 73808	within coordinates
Gm74521	predicted gene, 74521	1727 bp downstream
Hba-a2	hemoglobin alpha, adult chain 2	1728 bp upstream
Rr444566	regulatory region 444566	1390 bp distal
Rr444567	regulatory region 444567	935 bp distal
Rr444568	regulatory region 444568	634 bp distal
Rr444569	regulatory region 444569	1238 bp proximal
Tssr100842	transcription start site region 100842	1730 bp upstream