rs26831730 SNP Detail

Summary

• ID
  rs26831730
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:21101494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCAGTCAG ACAGTATCTT
  TTTGTTTATT TGTTTGGCTA GTTTTTTGGG GTTTTTTTTT TTTTTAGATT GTTTTATTTA
  TTTACATTCC AAATGTTTGC CCCCTCCCCT CCAAGAGTTC TTCACCTTCT CCTCCCTCTC
  CCAGACAGTA TCTTTGTCAG GATGTGCCCC ACCTACCCCA CCAGGTGGTA TTGGAGATCC
  R
  GCACACGTGC TTGGGAAGCG CTCCTCCTCA GCTGTATTTA CCAACTCTTT ATTACCTTGC
  AATTGCTTGC TTTGCTCCTA GAAAAATTTC CTGGGACAAG GTAAAATAAC TACATCTGAC
  ATTTGACATT GACTTGGGAT GTCTTGGGAC CCATGAGAGA TAATGACTTT CTGACACAGG
  TGGAGAGCAC CAATAGGGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37076549	NES08376363	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26831730					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37076549	NES08376363	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:21101494 () rs orientation: forward

Symbol	Name	Function Class
Peli1	pellino 1	1171 bp downstream
Rr385739	regulatory region 385739	957 bp upstream
Tssr100555	transcription start site region 100555	1770 bp downstream