rs26837313 SNP Detail

Summary

• ID
  rs26837313
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:33066494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTCAGGGT CCCCCCTCAC
  TTTCCAGAGA CAGTTATCCT GAAGGCAGAG GATGGAAAGG GGGTGGCTGC ACACTTCACA
  TGTCCCATCC CGTGCCCCAG GAAAAGGGCT CCCAGGAGCC TTGTCTACTT CCAGACAAAG
  CCCCGGAGTC ACCCTGGAAG AAGGGGTCCT CACAAGTCAC CAAGGCATAA CCCTTACTCT
  Y
  GGCATAGGAA ACTCAGGAAT GGAACTGAGG TCAAAGCTCC AGCCTCGGCT TGACCAAACA
  CTGTGGAACC CATAGATTGT GATGGATTCC CAGCTCTTAG CAAGAGTGAG TGGATAAACA
  CATAAATGAA GCACTAGATC TGAATCACTA AGGGTGAAGT TCCCTGTGGG CCCAGACTCT
  AAAGGCTTAT GAACAAATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37055735	NES08350793	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	C	C	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26837313					SNP	T	T	T	T	T	T	C	T	C	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37055735	NES08350793	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:33066494 () rs orientation: forward

Symbol	Name	Function Class
Fgf18	fibroblast growth factor 18	936 bp downstream
Rr239972	regulatory region 239972	1294 bp distal