rs26857592 SNP Detail

Summary

• ID
  rs26857592
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:28698057 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTAA CCAATTGATT TTGATTATTT
  S
  TGGACCACAG CAATTTCCCA TGATG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss37064232	NES08361913	PERLEGEN	MM_PANEL2	f	SNP	C		G	C	C	C	G		G	G	C	C		G	C	C	G		C
ss38839099	mCV23802628	ABI	CRAMUS_MOUSE	f	SNP		C	G					C		G
ss131881231	ENSMUSSNP5409576	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G							G
ss323609380	CHEV_11_28648057	CHEVERUD	SCREENING_POP	f	SNP													G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs26857592					SNP	C	C	G	C	C	C	G	C	G	G	C	C	G	G	C	C	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37064232	NES08361913	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:28698057 () rs orientation: forward

Symbol	Name	Function Class
Mir216b	microRNA 216b	1781 bp downstream
Mir216c	microRNA 216c	1791 bp upstream
Mir217hg	microRNA 217 host gene	within coordinates