rs26873827 SNP Detail

Summary

• ID
  rs26873827
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:16883918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAGTGTCA GCCAGGTTAA
  AACTATGTGC TCATATCTTG TTACTGGAAA GCTTTTACTC AGTCAGTCCA GTATTATTTC
  TCTCAACAAA TATTACTGAG GATCTGCTAG GGGTCTGGAA TTGTGTTAGA CCCTAGAGAT
  TTCACTGGGA CAACGGTAGT AAGTGTCCTG CATTCCTCTT AGTTTGAAGA CATTTTCTGT
  Y
  TGATTGGGTG TAATGAATGT TGGCTCTTTC AAAGCTTTCA TAACTATACT TTTATTCCCA
  TGTGTTCATT ATTATTGAAA TTTTCATTAT ATGTGTTTTT CCTATACTGA AGGTCTCCTT
  CGAATCAAGG ACTATACCAC ATTAGTCACT GTATTTCTGG TGCCTAGAAT GGTAATCAGC
  ACATCATGAG TGTTCAGTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37086650	NES08382363	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26873827					SNP	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37086650	NES08382363	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:16883918 () rs orientation: forward

Symbol	Name	Function Class
Eldr	Egfr long non-coding downstream RNA	791 bp downstream