rs26873828 SNP Detail

Summary

• ID
  rs26873828
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:16883871 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCACAAAT GATAATTCTT
  TGTTTTTCAT TTTCTGAAAC ATTCCCTTGG AGTGTCAGCC AGGTTAAAAC TATGTGCTCA
  TATCTTGTTA CTGGAAAGCT TTTACTCAGT CAGTCCAGTA TTATTTCTCT CAACAAATAT
  TACTGAGGAT CTGCTAGGGG TCTGGAATTG TGTTAGACCC TAGAGATTTC ACTGGGACAA
  Y
  GGTAGTAAGT GTCCTGCATT CCTCTTAGTT TGAAGACATT TTCTGTCTGA TTGGGTGTAA
  TGAATGTTGG CTCTTTCAAA GCTTTCATAA CTATACTTTT ATTCCCATGT GTTCATTATT
  ATTGAAATTT TCATTATATG TGTTTTTCCT ATACTGAAGG TCTCCTTCGA ATCAAGGACT
  ATACCACATT AGTCACTGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37086651	NES08382362	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26873828					SNP	C	C	T	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37086651	NES08382362	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:16883871 () rs orientation: forward

Symbol	Name	Function Class
Eldr	Egfr long non-coding downstream RNA	838 bp downstream