rs26873831 SNP Detail

Summary

• ID
  rs26873831
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:16882980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATATTAAG TCTATTTAGA
  CAGGCATTTT TCATTTTATG TGCATGAAAT CAGGAAAAAA TAAAGGACTT TTTAAAGTGT
  GTATTACTAT ATAATTTAAA TGGCATCCAA ATATAGCATA GAATTTCTTC TTGGCTGTAG
  GGATACCAGG AATGTCAACA TTCTACTTTA AGTGCATTCT CTCCTCTGTA GAGAGCAATA
  Y
  CCTGTAGAGC TGGCAGGGGC AAAGAACAGA GTTTAATCCA AGGATGGGTG ACTGGAAACC
  AGGAACTGAA TCTGTGCCCA GCTGAAGGAG TTCATCTACA GAACTAGAAA GTAGATTTGG
  TGAGAAACTG CATAGCATCT GGGAAACGAT AGCAAAGATC ACTAAGCAAT CTAGATAGGT
  GTGAAGTAGA ATTTCTGGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37086654	NES08382384	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26873831					SNP	T	T	C	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37086654	NES08382384	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:16882980 () rs orientation: forward

Symbol	Name	Function Class
Eldr	Egfr long non-coding downstream RNA	1729 bp downstream