rs26888833 SNP Detail

Summary

• ID
  rs26888833
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:74762118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAACCACAC TGAACAAAAC
  CGGAGTGGCA GCAGGTGGCA GCAGCCCTGC GGGGACCACA AGCCTCAGTG ATGTGATTCA
  TTGCAACAGT AATGACTCAT TAGGCGTCCC ACCTTCCCCC AGCCACTGCA AAGGAGCTGG
  GCTGGGATCT GGGGAGCAGC CACCCAATTT GGCCTCACCT GCCCTGCCAG CAGCCTCAGC
  M
  CAGGAACAGG TTCTCCTGAG GGCCGGCAGA GGCAGAGGCA GAGCTCAGCA ATTATCACCA
  GGAGGGATTG CTGGGGGAAG CCCAAACATC ACTCCCATCG CTGCTGGTTC GCACAGCGAC
  TCCTGGGAAA TTCAGGCAGA GTGCCAAGCT GTATCTGCGG AAGGAGGAAT CCCTTTCACC
  CTGCCAGTCT TCAGGGACCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss37158661	NES08476276	PERLEGEN	MM_PANEL2	f	SNP	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs26888833					SNP	A	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37158661	NES08476276	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:74762118 () rs orientation: forward

Symbol	Name	Function Class
Gm73205	predicted gene, 73205	within coordinates
Gm73221	predicted gene, 73221	within coordinates
Rr450993	regulatory region 450993	1335 bp distal
Rr450994	regulatory region 450994	within coordinates
Rr450995	regulatory region 450995	156 bp distal
Sgsm2	small G protein signaling modulator 2	within coordinates
Tssr109152	transcription start site region 109152	1996 bp upstream