rs26888835 SNP Detail

Summary

• ID
  rs26888835
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:74761818 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCGAGATA AGTTTCCACT
  AGCACAGTCA GGATATGAAA CATGGACTCA GGAAGTAACT ACTAATTTAT TTTAAAGCCA
  AAGTCTCATG AAGCCCAGTC ATCTCAGATT TGCTATGTAG CACAGCCTGT CTTTGAACTC
  TTGAGAGCTT CCTGCTTTCT GAGGGCCTTA TGTAGCCCTG GAGTGTCCAG CTGAGTGACT
  Y
  TCTTGCCACA GTCTTTCAGT CTGGGGCTGC TGCAGGTCTG TCTTTGTGGG AGGGTGATCG
  CCATTACTGA TGTTGAATCC TCAACGGATA GAGGGAAAAG AAACCACACT GAACAAAACC
  GGAGTGGCAG CAGGTGGCAG CAGCCCTGCG GGGACCACAA GCCTCAGTGA TGTGATTCAT
  TGCAACAGTA ATGACTCATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss37158663	NES08476274	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs26888835					SNP	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37158663	NES08476274	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:74761818 () rs orientation: forward

Symbol	Name	Function Class
Gm73205	predicted gene, 73205	within coordinates
Gm73221	predicted gene, 73221	within coordinates
Rr450993	regulatory region 450993	1035 bp distal
Rr450994	regulatory region 450994	within coordinates
Rr450995	regulatory region 450995	123 bp proximal
Sgsm2	small G protein signaling modulator 2	within coordinates
Tssr109152	transcription start site region 109152	1696 bp upstream