rs26888843 SNP Detail

Summary

• ID
  rs26888843
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:74758125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAGACAGTC CATGCAAATG AGCCCAAGAG ACCAGGCCAG
  GCCAGCAATG GAGTCCTGGG GATAGAAGCT GGGCACAGCC AGGAGAACCT GAAGCTAGAT
  Y
  TGGGTAGTTC TTCCTAGTCG GCTCAGTGCC ATTGGCTCTG TCCTGTCTGC CTGGGTGCCA
  GGTGTACCAC TGGCCAGCCA CACCCATACT GGGCATTCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	CAST/EiJ	FVB/NJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss37158671	NES08476294	PERLEGEN	MM_PANEL2	f	SNP		C		C	C		T	C
ss38842267	mCV27561129	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss132436606	ENSMUSSNP7200408	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss323749989	CHEV_11_74680801	CHEVERUD	SCREENING_POP	f	SNP						T			T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	CAST/EiJ	FVB/NJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs26888843					SNP	T	C	C	C	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37158671	NES08476294	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:74758125 () rs orientation: forward

Symbol	Name	Function Class
Gm73205	predicted gene, 73205	within coordinates
Mir6926	microRNA 6926	828 bp downstream
Sgsm2	small G protein signaling modulator 2	within coordinates
Tssr109152	transcription start site region 109152	1956 bp downstream