rs26892167 SNP Detail

Summary

• ID
  rs26892167
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67383142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTATTTGA TTCAAATGTA
  CCTTGTATGC ACAGCTAGAC ATGGGTAGTT TTCTACAATC ATTTTAATAA TTTTCTGCGT
  GGAAAAAATG TCATTTTGTA GAATTTCCCA TTTGTGGCAT GGTGTTGGTG GTGCTCAGAA
  AGCTCCAGAA CTTTCAGCAT TCAGGAATTT GGATTTACAG TTCCAGGATG CTCACCATGT
  R
  GGGTTTATGC ACCATCAAGT GCACTGTCTC AAGGACCATT TCTTTTTTTT TTATTTTTTT
  ATTTTTTATT TTTTTTCCAT TTTTATTAGG TATTTAGCTC ATTTACATTT CCAATGCTAT
  ACCAAAAGTC CCCCATACCC ACCCACCCCC ACTCCCCTAC CCACCCACTC CCCCCTTTTG
  GCCCTGGCGT TACCCTGTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37171690	NES08491889	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26892167					SNP	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37171690	NES08491889	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67383142 () rs orientation: forward

Symbol	Name	Function Class
Gas7	growth arrest specific 7	within coordinates
Tssr102241	transcription start site region 102241	1 bp upstream