rs26892336 SNP Detail

Summary

• ID
  rs26892336
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:67145442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGAG ACTTTCATGC ATGGAACTGG
  R
  CAGCCTGAAC CACCAGTGAT CAGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37172558	NES08484452	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	A	A	A	G	A	A	A	A	A	G	A
ss132326615	ENSMUSSNP3964325	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs26892336					SNP	A	G	G	A	A	A	G	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37172558	NES08484452	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:67145442 () rs orientation: forward

Symbol	Name	Function Class
Myh4	myosin, heavy polypeptide 4, skeletal muscle	within coordinates
Tssr3528	transcription start site region 3528	117 bp upstream
Tssr3529	transcription start site region 3529	173 bp upstream
Tssr102201	transcription start site region 102201	1098 bp downstream
Tssr102202	transcription start site region 102202	609 bp downstream
Tssr102203	transcription start site region 102203	546 bp downstream
Tssr102204	transcription start site region 102204	150 bp downstream
Tssr102205	transcription start site region 102205	57 bp upstream
Tssr102206	transcription start site region 102206	161 bp upstream
Tssr102207	transcription start site region 102207	805 bp upstream
Tssr102208	transcription start site region 102208	975 bp upstream
Tssr102209	transcription start site region 102209	1010 bp upstream
Tssr102210	transcription start site region 102210	1028 bp upstream
Tssr102211	transcription start site region 102211	1038 bp upstream
Tssr102212	transcription start site region 102212	1060 bp upstream
Tssr102213	transcription start site region 102213	1212 bp upstream
Tssr102214	transcription start site region 102214	1568 bp upstream
Tssr102215	transcription start site region 102215	1582 bp upstream
Tssr102216	transcription start site region 102216	1626 bp upstream
Tssr102217	transcription start site region 102217	1780 bp upstream
Tssr108535	transcription start site region 108535	1906 bp upstream
Tssr108536	transcription start site region 108536	562 bp upstream
Tssr108537	transcription start site region 108537	541 bp upstream
Tssr108538	transcription start site region 108538	31 bp upstream
Tssr108539	transcription start site region 108539	150 bp downstream
Tssr108540	transcription start site region 108540	210 bp downstream
Tssr108541	transcription start site region 108541	819 bp downstream
Tssr108542	transcription start site region 108542	980 bp downstream
Tssr108543	transcription start site region 108543	1095 bp downstream
Tssr108544	transcription start site region 108544	1678 bp downstream